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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ATAC-seq
10
DNase-seq
1
FAIRE-seq
Assay category
257
DNA binding
41
DNA accessibility
30
Transcription
5
3D chromatin structure
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
22
bam
22
bigWig
21
bed narrowPeak
12
bigBed narrowPeak
8
bed broadPeak
8
fastq
7
bed bed3+
7
bigBed broadPeak
1
tar
Organism
41
Homo sapiens
Biosample type
28
tissue
7
primary cell
4
in vitro differentiated cells
2
cell line
Organ
9
pancreas
7
epithelium
6
blood vessel
6
limb
6
vasculature
4
connective tissue
3
artery
3
kidney
3
nerve
3
vein
2
adipose tissue
2
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
1
spleen
Project
41
AMP
Genome assembly (visualization)
25
hg19
22
GRCh38
Lab
40
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
41 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
14
body of pancreas
4
tibial artery
1
2
tibial nerve
1
2
adipose tissue
1
+ See 3 more…
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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