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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
10
DNase-seq
1
FAIRE-seq
Assay category
245
DNA binding
45
Transcription
37
DNA accessibility
15
3D chromatin structure
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
18
bigWig
15
bam
15
bed narrowPeak
12
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
2
tsv
1
tar
Organism
37
Homo sapiens
Biosample type
22
tissue
7
primary cell
4
cell line
4
in vitro differentiated cells
Organ
9
epithelium
8
pancreas
6
blood vessel
6
limb
6
vasculature
3
artery
3
connective tissue
3
kidney
3
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
37
AMP
Genome assembly (visualization)
22
hg19
14
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
BIOSAMPLE
ASSAY
37 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
15
tibial artery
1
2
tibial nerve
1
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
EndoC_BH1
2
Panc1
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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