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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
7
DNase-seq
1
FAIRE-seq
Assay category
221
DNA binding
34
DNA accessibility
24
Transcription
6
3D chromatin structure
Date released
109
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
49
February, 2021
34
May, 2021
30
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
12
August, 2021
11
August, 2017
10
April, 2020
10
November, 2018
8
October, 2017
7
August, 2020
7
July, 2019
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
15
bam
14
bed narrowPeak
13
bigWig
11
bigBed narrowPeak
8
bed broadPeak
7
bed bed3+
7
bigBed broadPeak
1
fastq
1
tar
Organism
34
Homo sapiens
Biosample type
24
tissue
5
primary cell
4
in vitro differentiated cells
1
cell line
Organ
8
pancreas
7
epithelium
6
blood vessel
6
limb
6
vasculature
3
artery
3
connective tissue
kidney
3
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
34
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
30
AMP-T2D consortium
2
Mark McCarthy, Oxford
1
Bing Ren, UCSD
1
Maike Sander, UCSD
Audit category:
4
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
34 results
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Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
17
tibial artery
1
2
tibial nerve
1
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
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