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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ATAC-seq
3
DNase-seq
2
FAIRE-seq
Assay category
253
Transcription
147
DNA binding
61
DNA accessibility
10
DNA methylation
Date released
18
May, 2022
14
September, 2018
7
August, 2020
5
August, 2017
5
October, 2017
5
September, 2017
3
November, 2018
3
September, 2020
1
March, 2019
Available data
75
bam
74
bed narrowPeak
61
fastq
51
bigWig
39
zippedFastqFolder
32
bigBed narrowPeak
9
bed broadPeak
7
bed bed3+
7
bigBed broadPeak
2
tsv
Organism
61
Homo sapiens
Biosample type
32
primary cell
29
tissue
Organ
61
pancreas
32
epithelium
4
connective tissue
4
liver
3
adipose tissue
3
brain
2
spleen
Project
51
AMP
10
HPAP
Genome assembly (visualization)
50
hg19
40
GRCh38
Lab
31
AMP-T2D consortium
18
Kyle Gaulton, UCSD
10
Klaus Kaestner, Upenn
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
organ_slims!
kidney
BIOSAMPLE
ASSAY
61 results
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ATAC-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
tissue
islet of Langerhans
20
1
1
body of pancreas
4
2
pancreas
1
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