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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
201
DNase-seq
102
ATAC-seq
3
FAIRE-seq
Assay category
1380
DNA binding
936
Transcription
306
DNA accessibility
14
DNA methylation
Date released
183
June, 2019
45
May, 2020
14
October, 2019
13
May, 2021
10
August, 2021
10
February, 2021
8
July, 2019
7
November, 2018
6
November, 2019
5
August, 2017
3
October, 2017
2
November, 2020
Available data
410
bed narrowPeak
306
bam
299
bigWig
209
bigBed narrowPeak
202
bed bed3+
199
bed broadPeak
199
bigBed broadPeak
64
xls
41
fastq
21
zippedFastqFolder
12
tsv
8
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
306
Homo sapiens
Biosample type
186
tissue
92
primary cell
18
in vitro differentiated cells
10
cell line
Organ
80
kidney
pancreas
44
limb
42
epithelium
42
heart
35
brain
33
musculature of body
23
vasculature
21
blood vessel
18
ureter
14
artery
14
connective tissue
bone element
8
liver
8
skeleton
5
adipose tissue
4
eye
3
nerve
3
vein
2
spleen
Project
306
AMP
Genome assembly (visualization)
283
hg19
256
GRCh38
Lab
306
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
1
inconsistent replicate
organ_slims!
pancreas
bone element
BIOSAMPLE
ASSAY
306 results
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Clear Filters
DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
1
muscle of leg
13
+ See 41 more…
primary cell
monocyte
15
cardiac fibroblast
3
endothelial cell of umbilical vein
2
1
osteoblast
1
2
B cell
2
+ See 45 more…
in vitro differentiated cells
neural progenitor cell
10
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
adipocyte
1
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
smooth muscle cell of the coronary artery
8
HepG2
1
glomerular visceral epithelial cell
1
See all biosamples
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