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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ATAC-seq
30
DNase-seq
8
snATAC-seq
Assay category
166
Transcription
154
DNA binding
86
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Date released
35
February, 2023
30
June, 2019
8
February, 2021
8
January, 2021
4
July, 2019
1
January, 2018
Available data
77
bed narrowPeak
42
bam
35
bigWig
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
30
bigBed narrowPeak
Organism
86
Homo sapiens
Biosample type
66
tissue
11
primary cell
9
cell line
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
78
AMP
8
T1D
Genome assembly (visualization)
77
GRCh38
40
hg19
Lab
78
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
86 results
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ATAC-seq
DNase-seq
snATAC-seq
tissue
coronary artery
36
2
heart
18
heart left ventricle
2
3
right atrium auricular region
1
2
heart right ventricle
1
+ See 1 more…
primary cell
peripheral blood mononuclear cell
8
cardiac fibroblast
3
cell line
smooth muscle cell of the coronary artery
8
GM12878
1
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