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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
47
ATAC-seq
30
DNase-seq
Assay category
166
Transcription
94
DNA binding
77
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
20
control
12
transcription factor
6
RNA binding protein
Date released
57
April, 2019
35
February, 2023
35
June, 2019
21
May, 2019
14
February, 2021
5
October, 2019
4
July, 2019
Available data
151
bed narrowPeak
135
bam
108
bigWig
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
6
tagAlign
Organism
171
Homo sapiens
Biosample type
149
tissue
14
cell line
8
primary cell
Organ
581
liver
391
pancreas
255
brain
252
epithelium
215
kidney
187
connective tissue
171
heart
160
vasculature
155
blood vessel
110
limb
83
artery
81
adipose tissue
74
musculature of body
69
blood
69
bodily fluid
38
nerve
37
eye
22
embryo
22
spleen
20
vein
18
ureter
12
bone element
12
skeleton
10
lung
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
171
AMP
Genome assembly (visualization)
150
GRCh38
113
hg19
Lab
171
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
171 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
5
36
2
heart left ventricle
35
2
3
heart
14
18
heart right ventricle
13
1
right atrium auricular region
10
1
2
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cell line
smooth muscle cell of the coronary artery
6
8
primary cell
cardiac fibroblast
5
3
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