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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
DNase-seq
3
ATAC-seq
Assay category
360
DNA binding
162
Transcription
8
DNA accessibility
1
DNA methylation
Date released
3
November, 2018
2
June, 2019
1
August, 2017
1
February, 2021
1
October, 2019
Available data
8
bam
8
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
fastq
1
bed bed3
Organism
8
Homo sapiens
Biosample type
4
tissue
3
primary cell
1
cell line
Organ
154
kidney
77
heart
67
pancreas
57
vasculature
55
blood vessel
51
epithelium
49
artery
44
limb
34
brain
33
musculature of body
18
ureter
14
connective tissue
8
bone element
8
liver
8
skeleton
5
adipose tissue
4
eye
3
nerve
2
spleen
2
vein
Project
8
AMP
Genome assembly (visualization)
28
hg19
8
GRCh38
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
8 results
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DNase-seq
ATAC-seq
tissue
liver
2
right lobe of liver
1
1
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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