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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ATAC-seq
1
DNase-seq
Assay category
200
DNA binding
193
Transcription
23
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
1
August, 2017
1
February, 2021
1
October, 2019
Available data
28
bed narrowPeak
26
bigWig
8
bam
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
fastq
1
bed bed3
Organism
23
Homo sapiens
Biosample type
21
tissue
1
cell line
1
primary cell
Organ
141
pancreas
83
epithelium
83
kidney
47
heart
46
blood vessel
46
vasculature
45
artery
28
eye
23
liver
21
connective tissue
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
limb
4
adipose tissue
4
brain
2
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
23
AMP
Genome assembly (visualization)
22
hg19
2
GRCh38
Lab
20
Karen Mohlke, UNC
3
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
23 results
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ATAC-seq
DNase-seq
tissue
liver
20
right lobe of liver
1
cell line
HepG2
1
primary cell
Liver fetal (hepatocyte)
1
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