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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ATAC-seq
6
DNase-seq
Assay category
552
DNA binding
255
Transcription
41
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
20
May, 2022
9
February, 2021
4
February, 2023
3
November, 2018
2
August, 2017
2
June, 2019
1
October, 2019
Available data
36
bed narrowPeak
26
bigWig
16
bam
6
bigBed narrowPeak
5
bed bed3
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
fastq
Organism
41
Homo sapiens
Biosample type
37
tissue
3
primary cell
1
cell line
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
41
AMP
Genome assembly (visualization)
40
hg19
16
GRCh38
Lab
21
AMP-T2D consortium
20
Karen Mohlke, UNC
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
41 results
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ATAC-seq
DNase-seq
tissue
liver
20
2
right lobe of liver
1
2
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
+ See 9 more…
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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