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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ATAC-seq
6
DNase-seq
Assay category
552
DNA binding
235
Transcription
21
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
9
February, 2021
4
February, 2023
3
November, 2018
2
August, 2017
2
June, 2019
1
October, 2019
Available data
16
bam
16
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
5
bed bed3
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
fastq
Organism
21
Homo sapiens
Biosample type
17
tissue
3
primary cell
1
cell line
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
9
liver
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
21
AMP
Genome assembly (visualization)
20
hg19
16
GRCh38
Lab
21
AMP-T2D consortium
Karen Mohlke, UNC
Audit category:
1
inconsistent ontology term
1
inconsistent replicate
lab.title!
Karen Mohlke, UNC
BIOSAMPLE
ASSAY
21 results
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ATAC-seq
DNase-seq
tissue
right lobe of liver
1
2
liver
2
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
+ See 9 more…
primary cell
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
hepatocyte
1
cell line
HepG2
1
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