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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ChIP-seq
47
WGBS
Assay category
342
Transcription
136
DNA accessibility
88
DNA binding
47
DNA methylation
4
3D chromatin structure
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
85
May, 2021
41
May, 2022
6
February, 2021
3
March, 2020
Available data
88
bam
88
bed narrowPeak
88
bigWig
84
tagAlign
41
zippedFastqFolder
6
fastq
6
tsv
Organism
135
Homo sapiens
Biosample type
131
primary cell
2
cell line
2
tissue
Organ
51
pancreas
49
epithelium
Project
AMP
88
T1D
47
HPAP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
84
Kyle Gaulton, UCSD
47
Klaus Kaestner, Upenn
4
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
award.project!
AMP
BIOSAMPLE
ASSAY
135 results
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ChIP-seq
WGBS
primary cell
monocyte
84
pancreatic alpha cell
31
pancreatic beta cell
16
cell line
EndoC_BH1
2
tissue
islet of Langerhans
2
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