Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
555
ChIP-seq
Assay category
555
DNA binding
389
DNA accessibility
Target of assay
485
histone modification
484
histone
251
narrow histone mark
233
broad histone mark
70
transcription factor
21
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
145
October, 2019
93
May, 2019
65
April, 2019
62
August, 2017
58
November, 2017
45
October, 2018
36
December, 2017
27
May, 2020
7
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
March, 2020
Available data
722
bam
575
bigWig
555
bed narrowPeak
377
bigBed narrowPeak
238
tagAlign
220
fastq
35
bed broadPeak
28
bed bed3+
1
tagAlign bed3+
Organism
549
Homo sapiens
Biosample type
555
tissue
392
cell line
226
primary cell
110
in vitro differentiated cells
2
stem cell
Organ
164
brain
89
liver
73
pancreas
67
heart
57
blood vessel
57
vasculature
48
limb
24
nerve
21
artery
20
kidney
19
musculature of body
12
spleen
7
adipose tissue
7
connective tissue
1
pituitary gland
Project
553
AMP
2
T1D
Genome assembly (visualization)
524
GRCh38
503
hg19
Lab
555
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
555 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
82
heart left ventricle
29
body of pancreas
26
tibial nerve
24
islet of Langerhans
20
+ See 99 more…
See all biosamples
Download