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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
212
ChIP-seq
Assay category
212
DNA binding
24
Transcription
5
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Target of assay
184
histone
184
histone modification
114
narrow histone mark
70
broad histone mark
28
control
Date released
85
November, 2017
84
October, 2019
28
May, 2019
15
October, 2017
Available data
196
bam
172
bigWig
170
bed narrowPeak
118
tagAlign
94
bigBed narrowPeak
18
fastq
15
bed broadPeak
bigBed broadPeak
1
tagAlign bed3+
Organism
212
Homo sapiens
Biosample type
209
tissue
3
primary cell
Organ
494
liver
218
pancreas
212
brain
153
connective tissue
123
epithelium
96
vasculature
95
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
15
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
212
AMP
Genome assembly (visualization)
165
GRCh38
117
hg19
Lab
212
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
212 results
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ChIP-seq
tissue
layer of hippocampus
23
brain
20
substantia nigra
16
angular gyrus
15
caudate nucleus
15
+ See 63 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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