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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
206
DNA accessibility
80
DNA binding
Target of assay
49
transcription factor
31
histone
31
histone modification
16
broad histone mark
15
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
64
November, 2017
13
August, 2017
3
October, 2019
Available data
1578
bam
1350
bigWig
1285
bed narrowPeak
857
fastq
801
bigBed narrowPeak
398
tagAlign
114
bed broadPeak
79
bigBed broadPeak
53
bed bed3+
3
tar
1
tagAlign bed3+
Organism
80
Homo sapiens
Biosample type
58
cell line
21
primary cell
1
tissue
Organ
58
liver
7
brain
6
epithelium
6
vasculature
4
blood vessel
2
vein
Project
80
AMP
Genome assembly (visualization)
80
hg19
63
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
13
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
80 results
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ChIP-seq
cell line
HepG2
58
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
tissue
medial globus pallidus
1
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