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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
448
ChIP-seq
Assay category
448
DNA binding
239
DNA accessibility
Target of assay
371
histone
371
histone modification
232
broad histone mark
139
narrow histone mark
77
transcription factor
32
RNA binding protein
4
chromatin remodeller
3
other context
3
other post-translational modification
Date released
97
May, 2019
64
April, 2019
63
November, 2017
52
October, 2019
50
December, 2017
45
October, 2018
32
August, 2017
23
June, 2019
7
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
Available data
1113
bam
939
bigWig
893
bed narrowPeak
448
bigBed narrowPeak
437
fastq
378
tagAlign
56
bed broadPeak
53
bed bed3+
21
bigBed broadPeak
1
tagAlign bed3+
Organism
442
Homo sapiens
Biosample type
377
tissue
cell line
57
primary cell
14
in vitro differentiated cells
Organ
94
brain
71
vasculature
69
blood vessel
64
heart
59
liver
53
pancreas
48
limb
36
epithelium
24
kidney
24
nerve
21
artery
15
connective tissue
14
musculature of body
12
spleen
10
vein
6
adipose tissue
2
eye
Project
448
AMP
Genome assembly (visualization)
446
GRCh38
396
hg19
Lab
448
AMP-T2D consortium
Audit category:
27
inconsistent control
20
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
7
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
biosample_type!
cell line
BIOSAMPLE
ASSAY
448 results
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Clear Filters
ChIP-seq
tissue
liver
38
heart left ventricle
28
body of pancreas
26
tibial nerve
24
kidney
18
+ See 27 more…
primary cell
skeletal muscle myoblast
14
endothelial cell of umbilical vein
10
skeletal muscle satellite cell
7
mesenchymal stem cell
6
kidney epithelial cell
4
+ See 8 more…
in vitro differentiated cells
hepatocyte
14
See all biosamples
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