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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
672
ChIP-seq
Assay category
1205
Transcription
672
DNA binding
450
DNA accessibility
38
DNA methylation
15
3D chromatin structure
Target of assay
425
histone modification
424
histone
244
broad histone mark
180
narrow histone mark
158
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
October, 2019
176
August, 2017
115
May, 2019
82
November, 2017
80
April, 2019
74
October, 2018
50
May, 2020
48
December, 2017
15
October, 2017
10
November, 2018
7
December, 2018
7
January, 2019
6
September, 2017
2
March, 2020
Available data
550
bam
430
bigWig
410
bed narrowPeak
335
bigBed narrowPeak
220
fastq
189
tagAlign
35
bed broadPeak
28
bed bed3+
Organism
665
Homo sapiens
Biosample type
672
tissue
461
cell line
255
primary cell
198
in vitro differentiated cells
3
stem cell
Organ
150
liver
125
brain
117
pancreas
78
heart
73
adipose tissue
73
connective tissue
50
blood vessel
50
vasculature
29
musculature of body
23
kidney
20
spleen
7
limb
5
artery
Project
670
AMP
2
T1D
Genome assembly (visualization)
403
GRCh38
382
hg19
Lab
672
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2019
BIOSAMPLE
ASSAY
672 results
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Clear Filters
ChIP-seq
tissue
liver
140
islet of Langerhans
50
subcutaneous abdominal adipose tissue
36
body of pancreas
35
heart left ventricle
35
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