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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
421
ChIP-seq
Assay category
421
DNA binding
8
DNA accessibility
Target of assay
244
transcription factor
100
histone
100
histone modification
74
control
66
recombinant protein
60
broad histone mark
40
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
400
bam
340
bigWig
333
fastq
319
bed narrowPeak
318
bigBed narrowPeak
92
tagAlign
73
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
421
Homo sapiens
Biosample type
315
cell line
97
tissue
9
primary cell
Organ
315
liver
106
brain
6
epithelium
6
vasculature
3
blood vessel
Project
421
AMP
Genome assembly (visualization)
287
hg19
286
GRCh38
Lab
421
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
421 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
brain
15
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
+ See 2 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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