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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
86
ChIP-seq
Assay category
212
DNA accessibility
183
Transcription
86
DNA binding
4
DNA methylation
1
3D chromatin structure
Target of assay
50
histone
50
histone modification
29
broad histone mark
21
control
21
narrow histone mark
15
transcription factor
7
recombinant protein
4
RNA binding protein
Date released
44
October, 2019
23
April, 2019
10
May, 2019
6
February, 2021
3
June, 2019
Available data
86
bam
64
bed narrowPeak
64
bigWig
45
bigBed narrowPeak
6
tagAlign
Organism
86
Homo sapiens
Biosample type
55
tissue
16
cell line
15
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
86
AMP
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
86
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
86 results
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ChIP-seq
tissue
kidney
27
tibial artery
23
coronary artery
5
cell line
smooth muscle cell of the coronary artery
6
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
primary cell
epithelial cell of proximal tubule
10
kidney epithelial cell
5
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