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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
111
ChIP-seq
Assay category
459
Transcription
111
DNA binding
57
DNA accessibility
6
DNA methylation
Target of assay
56
histone
56
histone modification
34
broad histone mark
33
control
22
narrow histone mark
22
transcription factor
6
RNA binding protein
Date released
50
August, 2017
27
October, 2019
23
October, 2018
6
February, 2021
5
May, 2019
Available data
71
bam
44
bigWig
37
fastq
32
bed narrowPeak
27
bigBed narrowPeak
14
tagAlign
4
bed bed3+
1
bed broadPeak
Organism
111
Homo sapiens
Biosample type
105
tissue
6
cell line
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
111
AMP
Genome assembly (visualization)
44
hg19
43
GRCh38
Lab
111
AMP-T2D consortium
Audit category:
12
missing controlled_by
BIOSAMPLE
ASSAY
111 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
tibial artery
23
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
+ See 3 more…
cell line
smooth muscle cell of the coronary artery
6
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