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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
8
WGBS
2
RRBS
Assay category
166
Transcription
94
DNA binding
77
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Target of assay
62
histone
62
histone modification
37
broad histone mark
25
narrow histone mark
20
control
12
transcription factor
6
RNA binding protein
Date released
57
April, 2019
21
May, 2019
10
July, 2019
6
February, 2021
5
June, 2019
5
October, 2019
Available data
99
bam
80
bigWig
74
bed narrowPeak
64
bigBed narrowPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
Organism
104
Homo sapiens
Biosample type
92
tissue
6
cell line
6
primary cell
Organ
559
liver
271
pancreas
220
brain
182
epithelium
160
connective tissue
105
vasculature
104
heart
101
blood vessel
79
adipose tissue
67
limb
60
blood
60
bodily fluid
56
kidney
45
musculature of body
35
nerve
34
artery
22
embryo
22
spleen
17
vein
6
eye
4
gonad
4
ovary
1
lymph node
1
pericardium
1
pituitary gland
Project
104
AMP
Genome assembly (visualization)
79
GRCh38
76
hg19
Lab
104
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
104 results
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ChIP-seq
WGBS
RRBS
tissue
heart left ventricle
35
4
1
heart
14
1
heart right ventricle
13
2
right atrium auricular region
10
right cardiac atrium
6
1
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cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
5
1
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