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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
238
ChIP-seq
Assay category
238
DNA binding
39
DNA accessibility
24
Transcription
4
DNA methylation
3
3D chromatin structure
Target of assay
193
histone
193
histone modification
119
narrow histone mark
74
broad histone mark
36
control
9
transcription factor
3
RNA binding protein
3
other context
3
other post-translational modification
Date released
91
November, 2017
84
October, 2019
28
May, 2019
15
October, 2017
7
December, 2018
7
January, 2019
6
November, 2018
Available data
216
bam
184
bigWig
182
bed narrowPeak
118
tagAlign
106
bigBed narrowPeak
38
fastq
15
bed broadPeak
6
bigBed broadPeak
1
tagAlign bed3+
Organism
238
Homo sapiens
Biosample type
229
tissue
9
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
129
epithelium
102
vasculature
99
blood vessel
94
heart
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
238
AMP
Genome assembly (visualization)
183
GRCh38
135
hg19
Lab
238
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
238 results
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Clear Filters
ChIP-seq
tissue
layer of hippocampus
23
brain
20
spleen
20
substantia nigra
16
angular gyrus
15
+ See 64 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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