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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
381
Transcription
275
DNA accessibility
57
DNA methylation
39
DNA binding
10
3D chromatin structure
Target of assay
119
histone
histone modification
63
narrow histone mark
56
broad histone mark
29
control
10
RNA binding protein
10
transcription factor
1
chromatin remodeller
Date released
15
August, 2017
12
June, 2019
6
November, 2017
May, 2021
3
October, 2019
2
May, 2019
1
August, 2021
Available data
39
bam
21
fastq
14
bigWig
10
bed narrowPeak
10
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
2
tagAlign
Organism
39
Homo sapiens
Biosample type
446
cell line
279
tissue
64
in vitro differentiated cells
39
primary cell
1
stem cell
Organ
26
epithelium
12
pancreas
6
brain
6
vasculature
5
kidney
4
blood vessel
4
connective tissue
3
heart
2
eye
2
musculature of body
2
vein
1
liver
Project
39
AMP
Genome assembly (visualization)
14
hg19
9
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
target.investigated_as!
histone modification
month_released!
May, 2021
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
cardiac fibroblast
3
epithelial cell of proximal tubule
3
skeletal muscle myoblast
3
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