Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
Assay category
201
Transcription
123
DNA accessibility
80
DNA binding
53
DNA methylation
8
3D chromatin structure
Target of assay
93
histone
93
histone modification
narrow histone mark
44
broad histone mark
27
control
9
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
18
August, 2017
15
October, 2019
12
December, 2017
10
September, 2018
9
November, 2019
4
June, 2019
4
May, 2019
4
November, 2017
2
August, 2021
2
May, 2021
Available data
80
bam
53
bigWig
49
bed narrowPeak
44
fastq
21
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
1
bed bed3+
Organism
80
Homo sapiens
Biosample type
57
primary cell
14
in vitro differentiated cells
9
cell line
Organ
492
liver
145
pancreas
120
connective tissue
101
brain
80
epithelium
76
vasculature
74
blood vessel
69
heart
61
adipose tissue
59
blood
59
bodily fluid
51
limb
37
kidney
28
artery
27
nerve
26
musculature of body
18
spleen
14
embryo
11
vein
2
eye
Project
80
AMP
Genome assembly (visualization)
53
hg19
49
GRCh38
Lab
80
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
Audit category:
10
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
80 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
11
pancreatic alpha cell
9
pancreatic beta cell
9
epithelial cell of proximal tubule
6
pancreatic ductal cell
6
+ See 6 more…
in vitro differentiated cells
hepatocyte
10
Hepatic endoderm
2
pancreatic PP cell
2
cell line
EndoC_BH1
9
See all biosamples
Download