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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
WGBS
10
Hi-C
10
RRBS
1
DNAme array
Assay category
436
Transcription
288
DNA accessibility
279
DNA binding
58
DNA methylation
10
3D chromatin structure
Date released
41
May, 2022
13
July, 2019
6
February, 2021
3
October, 2022
1
August, 2017
1
March, 2020
1
March, 2023
1
May, 2021
1
October, 2019
Available data
41
zippedFastqFolder
10
bed bedMethyl
10
bigBed bedMethyl
7
fastq
6
hic
6
tsv
4
bed bed3+
4
bedpe bed3+
4
bigWig
4
hdf5
3
cool
Organism
68
Homo sapiens
Biosample type
68
primary cell
54
tissue
5
cell line
4
in vitro differentiated cells
Organ
60
epithelium
50
pancreas
5
vasculature
4
blood vessel
4
brain
3
kidney
2
connective tissue
2
liver
2
vein
1
eye
1
heart
1
musculature of body
Project
50
HPAP
17
AMP
1
ITG
Genome assembly (visualization)
19
hg19
1
GRCh38
Lab
50
Klaus Kaestner, Upenn
17
AMP-T2D consortium
1
ITG
Audit category:
4
audit script error
2
inconsistent ontology term
BIOSAMPLE
ASSAY
68 results
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WGBS
Hi-C
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
1
pancreatic beta cell
16
1
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
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