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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
WGBS
21
RRBS
1
DNAme array
Assay category
1761
DNA binding
808
DNA accessibility
373
Transcription
84
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
27
July, 2019
15
August, 2017
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
29
bed bedMethyl
29
bigBed bedMethyl
14
fastq
11
bam
10
bigWig
tsv
Organism
84
Homo sapiens
Biosample type
52
primary cell
32
tissue
Organ
47
epithelium
43
pancreas
10
heart
7
connective tissue
6
adipose tissue
6
liver
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
43
AMP
41
HPAP
Genome assembly (visualization)
19
hg19
10
GRCh38
Lab
43
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
files.file_type!
tsv
month_released!
November, 2018
BIOSAMPLE
ASSAY
84 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 8 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 11 more…
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