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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
WGBS
16
RRBS
1
DNAme array
Assay category
1719
DNA binding
1508
Transcription
789
DNA accessibility
85
DNA methylation
28
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
25
July, 2019
7
November, 2018
6
February, 2021
5
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
30
bed bedMethyl
30
bigBed bedMethyl
16
fastq
15
bam
14
bigWig
6
tsv
Organism
85
Homo sapiens
Biosample type
57
primary cell
27
tissue
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
7
liver
adipose tissue
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
38
AMP
Genome assembly (visualization)
16
hg19
14
GRCh38
Lab
47
Klaus Kaestner, Upenn
38
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
adipose tissue
musculature of body
BIOSAMPLE
ASSAY
85 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
pancreas
2
1
aorta
2
body of pancreas
2
+ See 9 more…
cell line
HepG2
1
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