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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
WGBS
20
RRBS
1
DNAme array
Assay category
1322
Transcription
1194
DNA binding
767
DNA accessibility
89
DNA methylation
29
3D chromatin structure
Date released
41
May, 2022
26
July, 2019
9
August, 2017
6
February, 2021
6
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
32
bed bedMethyl
32
bigBed bedMethyl
17
fastq
15
bam
14
bigWig
6
tsv
Organism
89
Homo sapiens
Biosample type
57
primary cell
32
tissue
cell line
Organ
53
epithelium
53
pancreas
10
heart
connective tissue
6
adipose tissue
6
liver
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
42
AMP
Genome assembly (visualization)
18
hg19
14
GRCh38
Lab
47
Klaus Kaestner, Upenn
42
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
biosample_type!
cell line
BIOSAMPLE
ASSAY
89 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
pancreas
2
1
aorta
2
+ See 11 more…
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