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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
WGBS
17
RRBS
1
DNAme array
Assay category
1559
Transcription
1185
DNA binding
726
DNA accessibility
80
DNA methylation
27
3D chromatin structure
Date released
41
May, 2022
15
July, 2019
11
August, 2017
6
February, 2021
6
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
25
bed bedMethyl
25
bigBed bedMethyl
18
fastq
11
bam
10
bigWig
6
tsv
Organism
80
Homo sapiens
Biosample type
56
primary cell
24
tissue
Organ
53
epithelium
53
pancreas
heart
7
connective tissue
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
33
AMP
Genome assembly (visualization)
15
hg19
10
GRCh38
Lab
47
Klaus Kaestner, Upenn
33
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
heart
liver
BIOSAMPLE
ASSAY
80 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
aorta
2
+ See 7 more…
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