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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
WGBS
20
RRBS
DNAme array
Assay category
1917
Transcription
1851
DNA binding
830
DNA accessibility
93
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
26
July, 2019
15
August, 2017
6
February, 2021
5
November, 2018
Available data
41
zippedFastqFolder
33
bed bedMethyl
33
bigBed bedMethyl
19
fastq
16
bam
15
bigWig
6
tsv
Organism
93
Homo sapiens
Biosample type
57
primary cell
35
tissue
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
spleen
1
eye
1
limb
pericardium
Project
47
HPAP
46
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
47
Klaus Kaestner, Upenn
46
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
pericardium
spleen
assay_title!
DNAme array
BIOSAMPLE
ASSAY
93 results
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WGBS
RRBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 11 more…
cell line
HepG2
1
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