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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
WGBS
21
RRBS
1
DNAme array
Assay category
1858
Transcription
1811
DNA binding
731
DNA accessibility
54
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
May, 2022
27
July, 2019
15
August, 2017
6
February, 2021
5
November, 2018
1
May, 2021
Available data
34
bed bedMethyl
34
bigBed bedMethyl
19
fastq
16
bam
15
bigWig
6
tsv
Organism
54
Homo sapiens
Biosample type
36
tissue
17
primary cell
1
cell line
Organ
12
epithelium
12
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
spleen
1
eye
1
limb
1
pericardium
Project
48
AMP
6
HPAP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
48
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
organ_slims!
spleen
month_released!
May, 2022
BIOSAMPLE
ASSAY
54 results
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WGBS
RRBS
DNAme array
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 12 more…
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
cell line
HepG2
1
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