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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
6
total RNA-seq
2
small RNA-seq
1
ATAC-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
39
DNA binding
35
DNA accessibility
9
Transcription
6
3D chromatin structure
6
DNA methylation
Date released
33
June, 2019
4
July, 2019
2
February, 2020
2
March, 2020
2
May, 2022
1
January, 2018
Available data
40
bigWig
39
bam
34
bed bed3+
33
bed broadPeak
33
bed narrowPeak
33
bigBed broadPeak
33
bigBed narrowPeak
8
tsv
1
txt
Organism
44
Homo sapiens
Biosample type
41
tissue
3
primary cell
Organ
652
pancreas
515
connective tissue
409
adipose tissue
324
epithelium
288
kidney
243
heart
222
liver
125
vasculature
123
blood vessel
107
artery
74
bone element
61
brain
51
eye
51
limb
44
musculature of body
19
lung
18
ureter
16
skeleton
14
embryo
9
blood
9
bodily fluid
8
nerve
3
vein
2
spleen
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
44
AMP
Genome assembly (visualization)
41
hg19
39
GRCh38
Lab
44
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
44 results
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DNase-seq
total RNA-seq
small RNA-seq
ATAC-seq
single cell RNA-seq
snATAC-seq
tissue
muscle of arm
17
muscle of leg
13
skeletal muscle tissue
1
1
1
1
1
psoas muscle
2
forelimb muscle
1
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primary cell
skeletal muscle satellite cell
1
1
skeletal muscle cell
1
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