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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
187
single cell RNA-seq
2
small RNA-seq
Assay category
288
DNA accessibility
279
DNA binding
189
Transcription
58
DNA methylation
10
3D chromatin structure
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
40
September, 2020
33
May, 2022
12
February, 2021
5
July, 2019
3
August, 2018
3
June, 2018
1
November, 2018
1
September, 2018
Available data
128
fastq
102
bam
102
bigWig
102
tsv
52
zippedFastqFolder
2
csv
Organism
189
Homo sapiens
Biosample type
190
tissue
189
primary cell
2
cell line
2
in vitro differentiated cells
2
stem cell
Organ
74
pancreas
70
epithelium
5
connective tissue
3
brain
1
adipose tissue
1
musculature of body
Project
104
AMP
85
HPAP
Genome assembly (visualization)
102
GRCh38
102
hg19
Lab
104
AMP-T2D consortium
85
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
189 results
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single cell RNA-seq
small RNA-seq
primary cell
Langerhans cell
85
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
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