Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ATAC-seq
3
total RNA-seq
2
single cell RNA-seq
Assay category
31
DNA accessibility
12
DNA binding
5
3D chromatin structure
5
Transcription
2
DNA methylation
Date released
16
May, 2021
11
February, 2023
4
May, 2020
2
December, 2019
2
March, 2020
1
February, 2020
Available data
10
tsv
7
bigWig
4
bam
2
bed bed3+
1
bed bedgraph
1
bed narrowPeak
1
txt
Organism
36
Homo sapiens
Biosample type
18
cell line
10
primary cell
7
in vitro differentiated cells
1
tissue
Organ
18
epithelium
18
pancreas
4
connective tissue
1
brain
Project
36
AMP
Genome assembly (visualization)
158
hg19
GRCh38
Lab
35
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
36
audit script error
36
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
36 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
cell line
EndoC_BH1
18
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
in vitro differentiated cells
immature adipocyte
2
2
cardiomyocytes (cardiac muscle cell)
2
neuron cell of Hypothalamus (neuron)
1
tissue
cerebellum (Hemisphere)
1
Download