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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
total RNA-seq
2
single cell RNA-seq
Assay category
37
DNA binding
17
DNA accessibility
10
Transcription
2
DNA methylation
Date released
4
May, 2020
3
October, 2019
1
February, 2020
1
July, 2018
1
June, 2018
Available data
10
tsv
9
bam
9
bigWig
2
fastq
Organism
10
Homo sapiens
Biosample type
in vitro differentiated cells
6
primary cell
3
cell line
1
tissue
Organ
pancreas
34
epithelium
3
kidney
1
brain
Project
6
AMP
4
T1D
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
6
AMP-T2D consortium
4
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
5
audit script error
organ_slims!
pancreas
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
10 results
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total RNA-seq
single cell RNA-seq
primary cell
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
unclassified exocrine cell
2
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
tissue
cerebellum (Hemisphere)
1
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