Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
350
total RNA-seq
74
single cell RNA-seq
2
small RNA-seq
Assay category
426
Transcription
218
DNA binding
124
DNA accessibility
6
3D chromatin structure
6
DNA methylation
Date released
157
July, 2018
89
August, 2017
41
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
6
May, 2022
5
February, 2023
5
March, 2020
4
July, 2019
3
August, 2018
2
October, 2018
1
August, 2021
1
February, 2020
1
June, 2018
Available data
412
bam
408
tsv
406
bigWig
200
fastq
6
txt
Organism
426
Homo sapiens
Biosample type
291
tissue
102
primary cell
33
cell line
Organ
481
connective tissue
426
pancreas
401
adipose tissue
193
liver
166
heart
148
epithelium
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
417
AMP
HPAP
9
T1D
Genome assembly (visualization)
406
GRCh38
406
hg19
Lab
413
AMP-T2D consortium
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
38
inconsistent ontology term
award.project!
HPAP
BIOSAMPLE
ASSAY
426 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
islet of Langerhans
284
body of pancreas
3
2
pancreas
2
primary cell
pancreatic alpha cell
10
12
pancreatic beta cell
10
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 4 more…
cell line
EndoC_BH1
33
See all biosamples
Download