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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
total RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
484
DNA binding
107
Transcription
31
DNA accessibility
4
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
78
February, 2021
9
August, 2021
5
January, 2019
4
March, 2020
4
May, 2021
4
October, 2019
2
March, 2023
1
November, 2019
Available data
105
tsv
96
bam
96
bigWig
5
fastq
Organism
105
Homo sapiens
Biosample type
1227
tissue
436
primary cell
132
in vitro differentiated cells
107
cell line
2
stem cell
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
34
epithelium
33
pancreas
14
liver
embryo
4
kidney
Project
103
AMP
2
T1D
2
community
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
96
AMP-T2D consortium
9
Bing Ren, UCSD
2
Anna Gloyn, Oxford
Audit category:
36
inconsistent ontology term
organ_slims!
embryo
BIOSAMPLE
ASSAY
107 results
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total RNA-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
33
HepG2
14
EndoC-BH1
1
1
early embryonic cell
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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