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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
948
total RNA-seq
174
single cell RNA-seq
16
small RNA-seq
Assay category
1138
Transcription
691
DNA binding
465
DNA accessibility
24
DNA methylation
16
3D chromatin structure
Date released
450
February, 2021
156
August, 2021
143
May, 2020
120
July, 2018
August, 2017
47
July, 2019
47
September, 2023
39
May, 2021
27
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
14
February, 2023
9
April, 2020
9
March, 2020
6
April, 2018
4
May, 2023
1
December, 2019
Available data
961
tsv
834
bam
828
bigWig
72
txt
14
fastq
6
csv
Organism
1138
Homo sapiens
Biosample type
1138
tissue
436
primary cell
138
in vitro differentiated cells
115
cell line
2
stem cell
Organ
457
connective tissue
399
adipose tissue
202
pancreas
174
liver
115
kidney
109
heart
62
bone element
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
7
musculature of body
5
nerve
4
artery
4
skeleton
2
epithelium
1
spinal cord
Project
1075
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
829
GRCh38
829
hg19
Lab
989
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
5
audit script error
1
inconsistent ontology term
month_released!
August, 2017
BIOSAMPLE
ASSAY
1138 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
209
liver
167
1
1
kidney
49
64
bone tissue
58
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