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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
174
single cell RNA-seq
16
small RNA-seq
Assay category
1037
Transcription
Date released
444
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
50
August, 2021
39
May, 2021
31
July, 2019
26
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
13
February, 2023
9
March, 2020
6
April, 2018
1
May, 2023
Available data
931
tsv
907
bam
901
bigWig
103
fastq
59
txt
Organism
1037
Homo sapiens
Biosample type
1037
tissue
247
primary cell
136
in vitro differentiated cells
113
cell line
Organ
455
connective tissue
397
adipose tissue
289
pancreas
170
liver
62
bone element
50
kidney
19
eye
17
brain
15
heart
7
blood vessel
7
limb
7
vasculature
5
musculature of body
5
nerve
4
skeleton
2
artery
2
epithelium
1
spinal cord
Project
1030
AMP
7
T1D
Genome assembly (visualization)
902
GRCh38
902
hg19
Lab
955
AMP-T2D consortium
49
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
1037 results
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Clear Filters
total RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
liver
167
bone tissue
58
kidney
49
subcutaneous adipose tissue
7
omental fat pad
5
tibial nerve
5
heart
4
body of pancreas
3
heart left ventricle
3
retina
3
right atrium auricular region
3
right lobe of liver
3
visceral abdominal adipose tissue
3
ascending aorta
2
cerebellum
2
frontal cortex
2
pancreas
2
pigmented layer of retina
2
psoas muscle
2
thoracic aorta
2
Ammon's horn
1
C1 segment of cervical spinal cord
1
acetabular part of hip bone
1
amygdala
1
anterior cingulate cortex
1
aorta
1
brain
1
cardiac atrium
1
cardiac ventricle
1
caudate nucleus
1
cerebellum (Hemisphere)
1
coronary artery
1
diencephalon
1
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
1
gastrocnemius medialis
1
heart right ventricle
1
hypothalamus
1
ilium
1
ischium
1
left ventricle myocardium
1
metanephros
1
nucleus accumbens
1
occipital lobe
1
parietal lobe
1
pubis
1
putamen
1
skeletal muscle tissue
1
substantia nigra
1
temporal lobe
1
tibial artery
1
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