Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
total RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
484
DNA binding
115
Transcription
31
DNA accessibility
4
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
78
February, 2021
17
August, 2021
5
January, 2019
4
March, 2020
4
May, 2021
4
October, 2019
2
March, 2023
1
November, 2019
Available data
113
tsv
104
bam
104
bigWig
5
fastq
Organism
113
Homo sapiens
Biosample type
1215
tissue
338
primary cell
133
in vitro differentiated cells
115
cell line
2
stem cell
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
34
epithelium
33
pancreas
14
liver
8
embryo
4
kidney
Project
111
AMP
2
T1D
2
community
Genome assembly (visualization)
104
GRCh38
104
hg19
Lab
104
AMP-T2D consortium
9
Bing Ren, UCSD
2
Anna Gloyn, Oxford
Audit category:
36
inconsistent ontology term
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
115 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
33
HepG2
14
H1-hESC
8
EndoC-BH1
1
1
early embryonic cell
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
See all biosamples
Download