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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
single cell RNA-seq
11
total RNA-seq
1
small RNA-seq
Assay category
93
DNA accessibility
68
Transcription
52
DNA binding
4
DNA methylation
Date released
August, 2021
47
September, 2023
6
July, 2019
6
October, 2019
5
February, 2021
3
May, 2023
1
December, 2019
Available data
17
tsv
12
bam
12
bigWig
5
csv
5
txt
Organism
68
Homo sapiens
Biosample type
58
tissue
6
primary cell
4
cell line
Organ
481
connective tissue
478
pancreas
401
adipose tissue
201
epithelium
184
liver
74
heart
68
kidney
62
bone element
61
blood vessel
61
vasculature
56
artery
24
brain
19
eye
9
lung
9
musculature of body
7
limb
6
embryo
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
47
KPMP
21
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
47
KPMP
18
AMP-T2D consortium
3
Katalin Susztak, Upenn
Audit category:
5
audit script error
3
inconsistent ontology term
month_released!
August, 2021
November, 2018
BIOSAMPLE
ASSAY
68 results
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single cell RNA-seq
total RNA-seq
small RNA-seq
tissue
kidney
56
metanephros
1
1
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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