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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
247
total RNA-seq
184
single cell RNA-seq
2
small RNA-seq
Assay category
433
Transcription
288
DNA accessibility
279
DNA binding
58
DNA methylation
10
3D chromatin structure
Target of assay
3
control
Date released
76
February, 2023
56
September, 2020
55
May, 2021
48
July, 2018
47
May, 2020
43
April, 2018
33
May, 2022
27
September, 2018
18
July, 2019
13
February, 2021
5
December, 2019
4
November, 2020
3
August, 2018
June, 2018
2
October, 2018
2
October, 2019
1
November, 2018
Available data
251
bigWig
249
bam
249
tsv
245
fastq
52
zippedFastqFolder
2
bed bed3+
2
csv
Organism
433
Homo sapiens
Biosample type
1208
tissue
433
primary cell
138
in vitro differentiated cells
114
cell line
2
stem cell
Organ
162
epithelium
154
pancreas
15
connective tissue
6
kidney
5
liver
4
heart
3
brain
2
adipose tissue
2
artery
2
blood vessel
2
musculature of body
2
vasculature
1
pericardium
Project
177
HPAP
160
AMP
96
T1D
Genome assembly (visualization)
251
hg19
249
GRCh38
Lab
177
Klaus Kaestner, Upenn
158
AMP-T2D consortium
98
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
month_released!
June, 2018
November, 2019
BIOSAMPLE
ASSAY
433 results
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total RNA-seq
single cell RNA-seq
small RNA-seq
primary cell
Langerhans cell
85
pancreatic alpha cell
52
12
monocyte
54
exocrine cell
39
pancreatic beta cell
21
12
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