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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
total RNA-seq
70
single cell RNA-seq
Assay category
199
Transcription
129
DNA binding
111
DNA accessibility
53
DNA methylation
8
3D chromatin structure
Date released
37
February, 2023
33
April, 2018
33
July, 2018
26
February, 2021
26
September, 2018
16
September, 2020
6
May, 2021
5
December, 2019
5
July, 2019
3
August, 2018
3
October, 2019
2
March, 2020
2
October, 2018
1
June, 2018
1
November, 2019
Available data
147
fastq
146
bam
146
bigWig
146
tsv
Organism
199
Homo sapiens
Biosample type
163
primary cell
34
cell line
2
in vitro differentiated cells
tissue
Organ
199
epithelium
188
pancreas
57
heart
54
artery
54
blood vessel
54
vasculature
24
connective tissue
19
liver
14
embryo
10
kidney
3
brain
2
adipose tissue
2
musculature of body
1
pericardium
Project
144
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
146
GRCh38
146
hg19
Lab
146
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
35
inconsistent ontology term
month_released!
November, 2018
biosample_type!
tissue
BIOSAMPLE
ASSAY
199 results
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total RNA-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
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cell line
EndoC_BH1
33
glomerular visceral epithelial cell
1
in vitro differentiated cells
endothelial cell
1
intermediate endothelial cell
1
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