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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
total RNA-seq
3
single cell RNA-seq
Assay category
190
Transcription
165
DNA binding
34
DNA accessibility
1
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
180
bigWig
180
tsv
178
bam
2
bed bed3+
Organism
190
Homo sapiens
Biosample type
86
in vitro differentiated cells
60
primary cell
40
tissue
4
cell line
Organ
41
pancreas
11
epithelium
5
liver
3
heart
2
embryo
1
connective tissue
1
kidney
Project
139
AMP
51
T1D
Genome assembly (visualization)
180
hg19
178
GRCh38
Lab
131
AMP-T2D consortium
59
Kyle Gaulton, UCSD
Audit category:
71
inconsistent ontology term
2
audit script error
BIOSAMPLE
ASSAY
190 results
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total RNA-seq
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
embryonic stem cell
5
cardiomyocytes (cardiac muscle cell)
1
2
cardiac fibroblast
1
+ See 9 more…
primary cell
monocyte
52
hepatocyte
5
CD8-positive, alpha-beta T cell
2
embryonic stem cell
1
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
kidney
1
pancreas
1
cell line
EndoC_BH1
4
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