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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
167
total RNA-seq
107
single cell RNA-seq
Assay category
274
Transcription
187
DNA accessibility
43
DNA binding
3
3D chromatin structure
1
DNA sequencing
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
127
tsv
76
fastq
61
txt
15
bam
15
bigWig
Organism
274
Homo sapiens
Biosample type
170
tissue
76
primary cell
17
cell line
11
in vitro differentiated cells
Organ
93
heart
57
kidney
43
pancreas
39
epithelium
9
liver
8
embryo
6
blood vessel
6
vasculature
4
bone element
4
connective tissue
4
eye
4
skeleton
2
artery
Project
193
AMP
76
HPAP
5
T1D
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
126
AMP-T2D consortium
76
Klaus Kaestner, Upenn
57
Katalin Susztak, Upenn
10
Bing Ren, UCSD
5
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
274 results
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Clear Filters
total RNA-seq
single cell RNA-seq
tissue
kidney
49
8
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
+ See 17 more…
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
cell line
HepG2
9
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
7
immature adipocyte
2
adipocyte
1
preadipocyte
1
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