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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
234
total RNA-seq
18
small RNA-seq
3
single cell RNA-seq
Assay category
255
Transcription
108
DNA accessibility
50
DNA binding
27
DNA methylation
8
3D chromatin structure
Target of assay
3
control
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
253
bam
253
bigWig
253
tsv
Organism
255
Homo sapiens
Biosample type
190
tissue
65
primary cell
Organ
150
liver
16
connective tissue
12
adipose tissue
11
brain
11
heart
6
kidney
5
blood vessel
5
epithelium
5
vasculature
4
musculature of body
4
pancreas
2
artery
1
pericardium
Project
210
AMP
45
T1D
Genome assembly (visualization)
253
GRCh38
253
hg19
Lab
210
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
255 results
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Clear Filters
total RNA-seq
small RNA-seq
single cell RNA-seq
tissue
liver
145
1
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
right lobe of liver
2
2
+ See 14 more…
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 37 more…
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