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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
735
total RNA-seq
18
single cell RNA-seq
Assay category
753
Transcription
149
DNA accessibility
58
DNA binding
6
DNA methylation
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
94
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
738
tsv
733
bam
733
bigWig
12
fastq
6
csv
5
txt
Organism
753
Homo sapiens
Biosample type
593
tissue
78
cell line
60
primary cell
22
in vitro differentiated cells
Organ
449
connective tissue
386
adipose tissue
144
liver
58
bone element
52
artery
52
blood vessel
52
heart
52
vasculature
26
epithelium
26
pancreas
5
kidney
Project
696
AMP
45
T1D
12
HPAP
Genome assembly (visualization)
733
GRCh38
733
hg19
Lab
696
AMP-T2D consortium
45
Kyle Gaulton, UCSD
12
Klaus Kaestner, Upenn
Audit category:
48
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
753 results
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Clear Filters
total RNA-seq
single cell RNA-seq
tissue
adipose tissue
381
liver
143
1
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
+ See 1 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
primary cell
Langerhans cell
12
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 24 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
See all biosamples
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