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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
total RNA-seq
2
single cell RNA-seq
Assay category
129
Transcription
128
DNA binding
25
DNA accessibility
4
3D chromatin structure
Date released
83
May, 2021
18
February, 2021
15
February, 2018
7
August, 2021
2
December, 2019
2
March, 2020
2
October, 2019
Available data
124
tsv
122
bam
122
bigWig
15
fastq
Organism
129
Homo sapiens
Biosample type
479
tissue
270
primary cell
129
in vitro differentiated cells
82
cell line
2
stem cell
Organ
connective tissue
6
embryo
2
epithelium
1
heart
Project
129
AMP
Genome assembly (visualization)
122
GRCh38
122
hg19
Lab
124
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
89
inconsistent ontology term
2
audit script error
organ_slims!
connective tissue
pancreas
BIOSAMPLE
ASSAY
129 results
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total RNA-seq
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
embryonic stem cell
7
neural progenitor cell
7
cardiomyocytes (cardiac muscle cell)
3
2
pancreatic endoderm
4
definitive endodermal cell
2
endocrine cell
2
posterior foregut
2
primitive gut cell
2
endothelial cell
1
hematopoietic multipotent progenitor cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
islet precursor cell
1
lymphocyte of B lineage (iPSC)
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
smooth muscle cell
1
stem cell
1
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