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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
total RNA-seq
48
single cell RNA-seq
Assay category
242
DNA binding
198
Transcription
33
DNA accessibility
5
3D chromatin structure
Date released
563
February, 2021
190
May, 2020
182
May, 2021
180
August, 2021
168
July, 2018
90
February, 2023
89
August, 2017
65
July, 2019
60
May, 2022
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
1
November, 2018
Available data
180
bam
180
bigWig
180
tsv
50
fastq
Organism
198
Homo sapiens
Biosample type
142
tissue
50
primary cell
4
cell line
2
in vitro differentiated cells
Organ
157
pancreas
36
epithelium
14
eye
6
kidney
4
limb
4
nerve
2
connective tissue
2
heart
1
brain
1
liver
Project
198
AMP
Genome assembly (visualization)
180
GRCh38
180
hg19
Lab
198
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
organ_slims!
skeleton
BIOSAMPLE
ASSAY
198 results
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total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
134
tibial nerve
4
heart
2
brain
1
liver
1
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 12 more…
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
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