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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
total RNA-seq
163
single cell RNA-seq
1
small RNA-seq
Assay category
366
Transcription
223
DNA binding
200
DNA accessibility
63
DNA methylation
11
3D chromatin structure
Date released
92
August, 2021
78
February, 2021
40
February, 2023
33
April, 2018
33
July, 2018
26
September, 2018
16
September, 2020
15
July, 2019
9
May, 2021
5
December, 2019
5
October, 2019
4
March, 2020
3
August, 2018
3
February, 2020
2
October, 2018
1
June, 2018
1
November, 2019
Available data
312
tsv
215
bam
215
bigWig
147
fastq
Organism
366
Homo sapiens
Biosample type
166
primary cell
111
tissue
86
cell line
3
in vitro differentiated cells
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
125
kidney
67
blood vessel
67
vasculature
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
311
AMP
53
HPAP
2
T1D
Genome assembly (visualization)
215
GRCh38
215
hg19
Lab
313
AMP-T2D consortium
53
Klaus Kaestner, Upenn
Audit category:
35
inconsistent ontology term
BIOSAMPLE
ASSAY
366 results
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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
primary cell
pancreatic alpha cell
52
12
pancreatic beta cell
21
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
+ See 14 more…
tissue
heart left ventricle
3
18
heart right ventricle
1
17
left cardiac atrium
18
right cardiac atrium
18
heart
4
1
1
+ See 11 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
33
glomerular visceral epithelial cell
1
in vitro differentiated cells
cardiac fibroblast
1
endothelial cell
1
intermediate endothelial cell
1
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